FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35520275
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA34750.08.09470955-59
TCGCCGT44150.06.568309355-59
AGCGTCG126950.05.767327145
GAGCGTC160700.05.6838489
GCCGTAT53900.05.5684755-59
TAGATCG76600.05.488898145
GTCGCCG52650.05.39774155-59
AGAGCGT181050.05.24518168
ATCGGAA202550.05.189454145
TGGTCGC60950.05.04488950-54
Produced by FastQC (version 0.11.5)