FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128177810
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA827950.016.7674751
ATCGGAA859850.016.2469272
TCGGAAG881850.015.75116353
CGGAAGA912500.015.293514
TATGCCG262750.012.49887445-49
CTCGTAT300950.011.14320940-44
TCTCGTA303200.010.28106940-44
ATGCCGT337950.010.1080745-49
CGTATGC306400.09.97532945-49
AGAGCAC1597900.09.0917218
GCCGTCT360200.08.56613350-54
GAGCACA1736000.08.5104489
TCGTATG341400.08.48125245-49
GAAGAGC1790900.08.3143266
TGCCGTC352600.08.20384650-54
ATCTCGT377400.08.12142340-44
CGTCTTC434400.07.8472950-54
CCGTCTT439650.07.466657650-54
AAGAGCA2452300.06.35864837
AGATCGG802950.06.0583053145
Produced by FastQC (version 0.11.5)