FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51542768
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA56000.08.15647155-59
TCGCCGT68450.06.71530255-59
GTCGCCG81500.05.942492555-59
GCCGTAT84100.05.741534755-59
AGCGTCG198750.05.50942049
GAGCGTC247000.05.3433129
GCGTCGT183300.05.1808925145
TGGTCGC97950.05.166214550-54
CGTCGTG180750.05.0935564145
Produced by FastQC (version 0.11.5)