FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32713587
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG56950.08.70803445-49
GATCGGA143950.08.5854221
CTCGTAT63200.07.961024340-44
ATCGGAA160550.07.94723842
TCGGAAG170300.07.4495493
TCTCGTA66050.07.3321340-44
CGTATGC64950.07.300562445-49
ATGCCGT74350.06.845637345-49
TATCTCG70600.06.797979440-44
CGGAAGA183050.06.69304234
GCCGTCT77300.06.15389350-54
ATCTCGT84650.05.9437340-44
CGTCTTC98150.05.60021250-54
TCCGATC22851.2345832E-45.3934833
CCGTCTT101400.05.34920550-54
Produced by FastQC (version 0.11.5)