FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028871

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028871
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86731067
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG129600.06.10833245-49
ACGACGC27102.6491398E-75.8848336
GATCGGA513700.05.462228145
TAGATCG205100.05.444067145
CGACGCT29801.6517461E-65.35164367
AGATCGG543850.05.039426145
Produced by FastQC (version 0.11.5)