FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60479653
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG92250.06.868367745-49
GATCGGA283450.06.75738331
ATCGGAA309250.06.35432342
TCGGAAG315000.06.26127433
CGGAAGA339700.05.8910754
CTCGTAT109050.05.89003340-44
CGTATGC107600.05.86159145-49
TCTCGTA110050.05.441262240-44
ATGCCGT128900.05.09546445-49
Produced by FastQC (version 0.11.5)