FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60479653
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA71050.07.917297455-59
TCGCCGT82900.06.87301655-59
GAGCGTC281400.06.78423459
GATCGGA320850.06.1461481
AGAGCGT322850.06.0482998
GTCGCCG98850.05.9253555-59
GCCGTAT102300.05.668833355-59
TCGGAAG359800.05.6329223
ATCGGAA351800.05.57258652
CGGAAGA386850.05.16294774
AAGAGCG393450.05.149827
TGGTCGC117400.05.149616250-54
Produced by FastQC (version 0.11.5)