FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44908829
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA38850.06.568207755-59
GCGTCGG29151.7994535E-75.719815145
GTCGTGT189500.05.5469146145
AGCGTCG180500.05.542358145
CGTCGTG168850.05.3236966145
GATCGGA272200.05.2198815145
AGATCGG289200.05.2138405145
GCGTCGT168150.05.130289140-144
TCGCCGT50700.05.11882555-59
TCGTGTA186050.05.1042776145
Produced by FastQC (version 0.11.5)