FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29900212
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA29700.07.420521355-59
TCGCCGT35600.06.19071655-59
AGCGTCG111450.05.9840302145
GCGTCGT105050.05.7965455145
GAGCGTC143450.05.66031469
GTCGCCG44000.05.272475255-59
AGAGCGT165250.05.17682658
GATCGGA175350.05.1262755145
GCCGTAT45050.05.117402655-59
CGTCGTG105350.05.0231295145
AGATCGG185450.05.003445145
TCGTGTA118850.05.001505145
Produced by FastQC (version 0.11.5)