FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67179108
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA446550.019.6586781
ATCGGAA461700.019.1103422
TCGGAAG473100.018.6804473
CGGAAGA492500.017.7974134
TATGCCG138800.014.196671545-49
CTCGTAT154350.012.12834440-44
TCTCGTA154800.011.999413540-44
CGTATGC158650.011.92688545-49
ATGCCGT175100.010.75671345-49
AGAGCAC837350.010.6319668
TCGTATG173500.010.20405445-49
GCCGTCT187950.010.13693250-54
GAGCACA904000.010.0002669
TGCCGTC184100.09.83698950-54
GAAGAGC950000.09.7222576
ATCTCGT196550.09.2661340-44
CGTCTTC232400.08.69097550-54
CCGTCTT232150.08.40678450-54
CATCTCG235450.07.956932540-44
AAGAGCA1287700.07.4259567
Produced by FastQC (version 0.11.5)