FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44123250
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA49450.06.333587655-59
AGCGTCG213150.05.5442457145
TCGCCGT60550.05.483826655-59
GAGCGTC258850.05.321642145
GCGTCGT195100.05.202487145
CGTCGTG193350.05.0995865145
GCGTCGG34358.755669E-75.065528145
Produced by FastQC (version 0.11.5)