FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66855161
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA151750.012.66874955-59
TCGCCGT174250.010.86648955-59
GCCGTAT181500.010.7998855-59
GAGCGTC743250.09.5877179
GTCGCCG201800.09.38298255-59
TGGTCGC218750.09.27873550-54
CGTATCA208300.09.0837360-64
AGAGCGT794550.09.0051368
GTGGTCG237850.08.65553750-54
GATCGGA924150.08.31891251
AAGAGCG887950.08.1724137
ATCGGAA930450.08.1667152
TCGGAAG936150.08.0843813
CGGAAGA934500.07.9667874
CGGTGTA275950.07.198331435-39
GCGTCGG71650.07.184619145
TCTCGGT307850.07.12080345-49
CCGTATC203200.06.828592360-64
ATCGGGA87850.06.82776261
ACCGGTG309500.06.418027435-39
Produced by FastQC (version 0.11.5)