FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35327772
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA33400.07.9439555-59
GAGCGTC166200.06.4996469
AGCGTCG131200.06.465652145
TCGCCGT43400.06.41421355-59
AGAGCGT185600.06.09370958
GATCGGA198600.05.9507084145
AGATCGG212450.05.869918145
CGTCGTG120550.05.7136903145
GCGTCGT118800.05.5537367145
GCCGTAT52700.05.47487755-59
ATCGGAA205550.05.3615017145
GTCGCCG53300.05.250032455-59
GCGTCGG24958.192148E-55.2307296145
TCGGAAG214150.05.213903145
Produced by FastQC (version 0.11.5)