FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59738534
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG101150.06.72278545-49
GATCGGA471500.05.85658031
TCGGAAG490150.05.7390113
ATCGGAA483300.05.70034552
CGGAAGA504800.05.58677244
CTCGTAT122200.05.56481640-44
TCTCGTA120900.05.432766440-44
CGTATGC120800.05.42517545-49
CGTCTGA327500.05.1385403145
Produced by FastQC (version 0.11.5)