FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005029036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60915581
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA81150.011.67986255-59
TCGCCGT92850.010.22369455-59
GAGCGTC319300.08.7715859
GCCGTAT112650.08.74835155-59
GTCGCCG112900.08.44657155-59
TGGTCGC127450.07.78943450-54
AGAGCGT361850.07.7603238
GATCGGA378700.07.6480311
GTGGTCG141100.07.200227350-54
AGCGTCG260150.07.16794359
ATCGGAA410850.07.07223652
TCGGAAG422850.06.95207363
CGTATCA139150.06.842668560-64
CGGTGTA148850.06.62068835-39
AAGAGCG443050.06.37106047
CGGAAGA458350.06.36576034
ACCGGTG168150.05.990057535-39
CACCGGT168200.05.772871535-39
AGATCGG393250.05.5836163145
TCTCGGT197000.05.503002645-49
Produced by FastQC (version 0.11.5)