FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005029040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22133713
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG86400.06.6283174145
CGTCGTG78200.06.3963504145
GCGTCGT80150.06.1502857145
TAGATCG54650.06.1017947145
GATCGGA138100.06.0366235145
GTCGTGT87200.05.5699105145
GAGCGTC108150.05.22827145
ATCGGAA140250.05.220456145
CGGAAGA155650.05.0765343145
CGTGTAG93200.05.055771145
AGATCGG149750.05.034501145
Produced by FastQC (version 0.11.5)