FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005029058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160374303
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA172050.07.163114555-59
GAGCGTC756900.06.1300479
TCGCCGT204600.06.122739355-59
CGTCGTG562000.05.5077925145
AGAGCGT866250.05.47307638
AGCGTCG612450.05.3855095145
GTCGCCG242550.05.2962755-59
GATCGGA911700.05.2398577145
AGATCGG967400.05.200432145
GCCGTAT253550.05.066496455-59
Produced by FastQC (version 0.11.5)