FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005029074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64472964
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA63950.09.43220955-59
TCGCCGT80600.07.7895755-59
GAGCGTC358850.07.03023059
GTCGCCG95550.06.63149455-59
GCCGTAT99850.06.374953755-59
AGCGTCG295050.06.265906145
AGAGCGT405650.06.2370318
AGATCGG486400.05.9621897145
GCGTCGT272100.05.7552543145
CGTCGTG269200.05.655664145
ATCGGAA482000.05.640578145
TGGTCGC114850.05.63073250-54
GATCGGA464150.05.5191631
TCGTGTA292700.05.449282145
CGTGTAG297850.05.355061145
GTCGTGT295200.05.3294535145
AAGAGCG489200.05.3199637
TCGGAAG489700.05.2997193
CGTATCA127750.05.26645560-64
GTGGTCG128000.05.21085350-54
Produced by FastQC (version 0.11.5)