FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005029102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51211992
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA58350.010.38758555-59
GAGCGTC217250.010.2817299
GATCGGA246000.08.97051051
TCGCCGT70400.08.9391555-59
AGAGCGT249800.08.8837818
ATCGGAA269400.08.3412082
TCGGAAG286300.07.9019883
GTCGCCG81350.07.807207655-59
CGGAAGA303400.07.55224944
AAGAGCG306100.07.43922237
GCCGTAT86200.07.401582755-59
TGGTCGC96600.06.63435250-54
GTGGTCG109950.06.053002450-54
AGATCGG259000.05.9616475145
CGTATCA109000.05.87946460-64
TAGATCG100200.05.5706964145
Produced by FastQC (version 0.11.5)