FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005029105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51889879
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG130100.05.60576845-49
ACACGTC529450.05.5318966145
TCGGAAG758900.05.4833374145
GATCGGA760400.05.4820547145
AGATCGG790700.05.3086543145
TAGATCG268050.05.003496145
CGTCTGA482700.05.001319145
Produced by FastQC (version 0.11.5)