FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005029128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71529190
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA182700.010.3009755-59
GCGTCGG77900.09.770924145
TCGCCGT209150.09.07452155-59
GCCGTAT210600.09.02581255-59
GAGCGTC1056550.08.7348649
AGAGCGT1130600.08.2008258
CGTATCA238050.08.1427760-64
CCGTATC233450.08.09206760-64
GTCGCCG236200.08.07826255-59
TGGTCGC256950.07.465209550-54
AAGAGCG1270800.07.35878857
GTGGTCG270050.07.19434650-54
GGTCGCC266950.07.08798155-59
TCGGAAG1334850.07.00026663
CGGAAGA1353000.06.92779254
ATCGGAA1346050.06.9207142
GATCGGA1356700.06.78095871
GAAGAGC1712000.05.7712336
TCTCGGT356200.05.763499345-49
CGTCGTG881750.05.68089145
Produced by FastQC (version 0.11.5)