FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005029177

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005029177
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46262089
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG83500.07.605434445-49
GATCGGA363600.07.24506761
ATCGGAA374950.07.06260252
TCGGAAG377900.07.0219293
CGGAAGA393100.06.78705024
TCTCGTA100650.06.208605340-44
CTCGTAT101900.06.16090240-44
CGTATGC103400.06.0155245-49
ATGCCGT111750.05.942296545-49
AGATCGG368300.05.401877145
GCCGTCT117950.05.35945350-54
Produced by FastQC (version 0.11.5)