FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005067628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005067628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21685129
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTCCGTTGGTCAAGTTATTGGATCAATTGAGTATAGTAGTTCGCTTTG242940.11203069163203963No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAATTTAGTATAGTAGTTCGCTTTG223330.10298762806529764No Hit
CAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGC220460.10166414043467299No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)