FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005067655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005067655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14796669
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC6087964.114412507301474No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC5141213.474572554133636No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC3820592.582060867888577No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC3359822.270659700504215No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGAGTTCC1773251.1984116154791324No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGCTTTA747030.5048636284288038No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGCTTC670670.45325741895017047No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT323460.21860325455681953No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC285050.19264470942750697No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG269450.18210179601909052No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCGAGCGTG267010.18045277622956896No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCAGGCCAG261200.17652621681271644No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGAGTTCCA240130.1622865254335283No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTA223860.15129080741077605No Hit
GCCTGAAAGTCCAGGGAACGGCACTCGATCTTCACAGAGGTTCCACTCTT219210.14814820822172883No Hit
CCAAAACATAGTTGTGGCCTGAAAGTCCAGGGAACGGCACTCGATCTTCA218490.14766161221826346No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATACGGATGA215080.14535703947962883No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCAGGCCTG214980.14528945670136975No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT213740.14445143025095716No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGCTTC203120.13727413919984288No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGATTC201210.13598330813509446No Hit
GACGATACCAAAACATAGTTGTGGCCTGAAAGTCCAGGGAACGGCACTCG199690.13495604990555646No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC190850.1289817323074538No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCTGGTTTT185700.1255012192271112No Hit
GTCCAGGGAACGGCACTCGATCTTCACAGAGGTTCCACTCTTACAGATAA183630.12410225571714824No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG179260.12114888830722643No Hit
CCTGAAAGTCCAGGGAACGGCACTCGATCTTCACAGAGGTTCCACTCTTA172060.1162829282725727No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTTT171970.11622210377213951No Hit
GCCTTGGAGCCCTCATTGGAAGTTGCCATCAGCATGAGACTCTGTTTCGG170380.11514753759782016No Hit
GGCCTGAAAGTCCAGGGAACGGCACTCGATCTTCACAGAGGTTCCACTCT168420.11382291514394219No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATAGGGCTGG164070.11088306428967223No Hit
GGACAAAATGTATCCCCAGCAGTGGGATAAGCTCCAGGAGCATGGCTGAA163470.11047756762011775No Hit
GGGAACTGACGATACCAAAACATAGTTGTGGCCTGAAAGTCCAGGGAACG161070.10885558094189983No Hit
GCAAGATCTCCAGAGAACAGGAAGGAAAGTGTCTGAAGAGACCAAGACCA160420.10841629288321582No Hit
CAGGCAGTATCTGGAGTCATTGAGGGCGGGCTGCTCCTTGAGGGGCTGCG157490.10643611748022477No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTTTC155480.10507770363721727No Hit
GGAAGTTGCCATCAGCATGAGACTCTGTTTCGGGAACTGACGATACCAAA153880.10399637918507199No Hit
GGCTTGCATGGTTGATGAGAAACTTGTCCTTCTCGACGCCTTGCTCGTAT153010.103408409014218No Hit
GGAAGGAAAGTGTCTGAAGAGACCAAGACCAAGAGGTGTGAGGAAGTTTC151840.10261769050858675No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATGGGGTTTG150910.10198917067077733No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)