EGAF00005067681 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005067681
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3819468
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	349050	9.138707275463494	No Hit
GGGAAGTTTCTGGCGGTCACGCCCTGTCCGCTTTCGCTCCAGGTCACACT	75788	1.9842553989194305	No Hit
CACGCTGCTCGTATCCGACGGGGAATTCTCACAGGAGACGAGGGGGAAAA	32194	0.8428922561990309	No Hit
GGAAGTTTCTGGCGGTCACGCCCTGTCCGCTTTCGCTCCAGGTCACACTG	21938	0.5743731849566485	No Hit
TAGCTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGT	19425	0.5085786816383853	No Hit
GTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCA	13074	0.34229897985792784	No Hit
GGTGGTACCCAGTTATCAAGCATGCCAGGACCACAGGGCTGTTATCCTTT	12404	0.32475726986061937	No Hit
GGGAAGTTTCTGGCGGTCACGTTCTGTCCGCTTTCGCTCCAGGTCACACT	11507	0.30127232378959584	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10085	0.2640420079445619	No Hit
GTGGTACCCAGTTATCAAGCATGCCAGGACCACAGGGCTGTTATCCTTTG	8248	0.2159463045638817	No Hit
CTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGTCTC	7010	0.1835334135539295	No Hit
GCTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGTCT	6993	0.1830883253898187	No Hit
AGCTGCTGGCCGCGTACTTGTTGTTGCTTTGTTTGGAGGGTGTGGTGGTC	6471	0.1694215005859455	No Hit
GAAGTTTCTGGCGGTCACGCCCTGTCCGCTTTCGCTCCAGGTCACACTGA	5227	0.1368515196357189	No Hit
CGCTGCTCGTATCCGACGGGGAATTCTCACAGGAGACGAGGGGGAAAAGG	4764	0.12472941257787734	No Hit
TAGCTGCTGGCCGCGATCTCCTCCACCTTCATGATCTGAATGGAGTGGGC	4005	0.10485753513316515	No Hit
GCTGAAACCAGTTTAAATAGGTGCCAACACTCTGACTTGTCCGGCAAGAG	3885	0.10171573632767705	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTATC	44115	141.95949	2
GCGTTAT	44605	141.60278	1
TTATCCA	46060	134.81407	4
ATCCACC	46285	133.20323	6
TATCCAC	48715	127.10944	5
GTTATCC	48995	126.76942	3
GGGAAGT	12875	125.34742	1
GTATCAA	2275	117.91503	9
CACCTTC	54470	115.135056	9
CACGCTG	5550	109.7296	1
CCACCTT	57205	108.717865	8
AGCAGTG	2545	105.68749	2
CTCGTAT	5775	105.20609	8
GGAAGTT	15380	104.88447	2
GAAGTTT	15620	104.10839	3
AAGTTTC	15775	103.45177	4
TCGTATC	5920	102.75172	9
CGTTATG	435	101.66655	2
TTCTGGC	16840	99.84068	8
GCTCGTA	6095	98.847305	7