FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005067938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005067938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2238458
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA59320.2650038553325548No Hit
CGTTCGTTATCGGAATTAACCAGACAAATCTCTCCACCAACTAAGAACGG28860.12892803885531914No Hit
CGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGG27770.12405861535038853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)