FastQCFastQC Report
Thu 9 May 2024
EGAF00005068293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2843217
Total Bases426.4 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC74970.26368019043217594No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG69930.245953791075391No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)