FastQCFastQC Report
Sun 5 May 2024
EGAF00005068442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44727174
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1229950.27498942812707106No Hit
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTG494880.11064414666573837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)