FastQCFastQC Report
Tue 14 May 2024
EGAF00005068448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90166945
Total Bases6.7 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTG1787220.19821232714494208No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN912980.10125440093373464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)