FastQCFastQC Report
Thu 12 May 2022
EGAF00005068528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41334815
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG691160.16721013508830268No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG598750.14485367843064012No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT490200.11859252303415414No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC430710.10420029701354656No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA427300.10337532658607519No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN421310.10192618498473986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)