FastQCFastQC Report
Fri 10 May 2024
EGAF00005068548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10685920
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length105
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTG261040.24428406725859825No Hit
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC119670.1119884857831614No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)