FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17763528
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT29208.0035534E-116.75930741
TAACCCC43300.05.98520579
AAGAGCG559050.05.3310677
AGAGCGT515800.05.2895948
TCGGAAG552850.05.1955473
TCATTAA122750.05.149216760-64
ACACTCT57201.8189894E-125.1119341
GTGAGTA38407.143535E-85.06420142
TAGCATG26101.4611839E-45.04142481
GATCGGA555050.05.03097961
Produced by FastQC (version 0.11.5)