FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17315789
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG45150.06.441899140-144
GATCGGA138400.06.2005534140-144
AGATCGG158550.05.6304846140-144
CTAGATC15150.05.607376140-144
Produced by FastQC (version 0.11.5)