FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14840874
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA186550.07.9166781
AGAGCGT194300.07.03948458
TCGGAAG200600.07.0337693
ATCGGAA231600.06.37536672
AAGAGCG229950.06.29249247
GAGCGTC219600.06.22846949
GAAGAGC281650.05.367476
GATTAGG50900.05.31787425-29
ATTAGGC50750.05.305221625-29
Produced by FastQC (version 0.11.5)