FastQCFastQC Report
Sat 11 May 2024
EGAF00005068726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15621331
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG563920.36099356706544405No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA430330.2754758861456812No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA335870.21500728715113968No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGATAGACGGAGTGTAGATCTCGGT247350.15834118104276773Illumina Single End PCR Primer 1 (96% over 28bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)