FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17433288
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA49700.07.8192437
ACACTAT57200.07.17160138
CACTATA62950.06.5165319
CACGTCT209300.05.5091505140-144
CACACGT223800.05.390503140-144
GATCGGA403000.05.2574625140-144
GAGCACA299650.05.211749
ACACGTC229250.05.18062140-144
ACGTCTG233700.05.155982140-144
AGAGCAC315300.05.151857140-144
CGTCTGA231250.05.1108837140-144
TAGATCG122500.05.0828996140-144
Produced by FastQC (version 0.11.5)