FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12858087
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT30650.07.62838941
GTGAGTA37950.06.6402962
TACACTA36802.0008883E-116.06449138
TAACCCC45200.05.89319
CTACACT40457.2759576E-125.87342077
Produced by FastQC (version 0.11.5)