FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15456455
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA194750.06.45268771
TCGGAAG205100.05.8617943
AGAGCGT218900.05.360778
ATCGGAA241500.05.3066682
GAGCGTC247600.05.14645249
AAGAGCG242150.05.08389957
CCTAATT31605.7134894E-65.01250362
Produced by FastQC (version 0.11.5)