FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005068949

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005068949
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19472960
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATC17800.06.7918158140-144
TAGATCG73050.06.2060738140-144
GATCGGA209450.05.765118140-144
AGATCGG224650.05.669744140-144
GTGAGTA67100.05.36411432
CACACGT132550.05.1032248140-144
AGAGCAC176000.05.004554140-144
Produced by FastQC (version 0.11.5)