FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005069121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005069121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14665646
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA84650.014.5420469
GCCACTC94450.013.7191418
AGCCACT110150.011.3715887
GGCCTAA22050.011.23095275-79
AAGCCAC118800.011.149566
ACAAAGC134600.010.1081843
TACAAAG144800.08.3757422
GGCCCCT37000.07.1607537110-114
AGGGGCC39000.07.014198105-109
AAAGCCA211200.06.7829025
GAGAGAC73550.06.77249962
ATACAAA193850.06.69205431
AGGCCTA39400.06.577683475-79
GGGCCCC43650.06.2677546110-114
GGGGCCC43850.06.2383966105-109
TTAGGGG42400.06.214043105-109
CCCCTAA44650.06.191878110-114
CAAAGCC237900.05.9611244
GCCCCTA47850.05.898163110-114
TAGGGGC45900.05.8656745105-109
Produced by FastQC (version 0.11.5)