FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005069197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005069197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15050325
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA228900.09.0263529
AGAGCAC234300.08.9719488
GATCGGA268950.07.9964171
AAGAGCA327000.06.890857
TCGGAAG319900.06.869943
ATCGGAA352050.06.4499172
GAAGAGC357450.06.20375826
GGAAGAG391000.05.6535165
CGGAAGA460450.05.05306154
Produced by FastQC (version 0.11.5)