FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005069208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005069208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14917818
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGTCA46000.06.5739131
GGGGTGC48200.06.57261371
GGGGTAA61700.06.30145841
GGGGTAG40050.06.2921351
GGGGTCC26803.7467544E-86.1791051
GGGGTTG78700.06.12960621
CCCCTTG81050.05.77421331
GGGGTAC48800.05.75409841
GGCTAAT46550.05.7228791
CCCCTAC54900.05.6393441
GGGGTTA45205.456968E-125.5752211
GAGGTAT104700.05.57020041
GGGGTCG46953.6379788E-125.52076671
GAGGTCC45707.2759576E-125.5142231
GGCTATG184550.05.50094841
GACGTCC55200.05.47826051
CCCCTTA46251.0913936E-115.44864851
GGGGTAT79350.05.44423441
CCCTTAG26507.4195796E-65.43396231
CCCTATT80000.05.39999961
Produced by FastQC (version 0.11.5)