FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005069490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005069490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13411992
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT3155.5766795E-69.29846341
CGTCGCT2450.0038995168.27665341
CGCATTA2600.0066533317.79915441
TATGCCG3703.6389093E-47.307424545
TCGTATG5259.045156E-66.866557642
TATCTCG6352.3092454E-56.02235338
CGATGTA4650.00484170165.811948333
TCTCGTA4700.005425995.75256740
AAATGCG4900.0085974345.51776940
CACCGAT5500.00525529125.32079230
Produced by FastQC (version 0.11.5)