FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005069493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005069493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23822140
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG7850.010.90506145
CTCGTAT9200.08.81489141
CGTATGC10000.08.10959743
TCTCGTA9403.6379788E-126.949802440
TCGTATG11500.06.85601242
GCGAAAG9208.310197E-65.14085251
ATCTCGT16451.8189894E-115.061656539
Produced by FastQC (version 0.11.5)