FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005069512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005069512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15630176
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTAGA3600.00216373316.88978051
CTACTCG34150.06.594093334
TACTCGG34700.06.22999335
TCGGGAG39100.05.69540438
CTCGGGA37300.05.669138437
GCTACGA5600.00104171785.63709351
Produced by FastQC (version 0.11.5)