FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072155

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072155
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16771661
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT86450.0136.212281
GACGCTC101550.0115.773382
ACGCTCT110450.0106.207733
TTCCGAT109900.0106.181449
CTTCCGA114200.0101.994268
CGCTCTT117800.098.39254
TCTTCCG122550.094.929617
GCTCTTC242800.048.4786455
CTCTTCC392450.030.3406456
CCGATCT111500.023.21727210-14
TCCGATC105850.023.13715210-14
CGATCTA30150.016.95264210-14
CGTTGGA94050.016.2274571
ACCGCGC43900.015.6525791
GCGCGAT25500.014.9820192
CGCGATC27200.014.5700563
CGATCTG38700.013.76534710-14
GGCGCGA30600.013.7098711
GACGCGA5459.157016E-613.2718151
AAACGGG108450.012.81154257
Produced by FastQC (version 0.11.5)