FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4526894
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT1400.001034386525.7432791
CGTTGGA25150.017.1963041
CGAAACG2700.002445204615.9982245
TTCCGAT7302.1827873E-1115.779079
AAACGGG28600.015.6066597
AACGGGA23250.015.172518
GAAACGG30550.014.3748376
CTTCCGA8051.07320375E-1014.308978
ACGGGAT18350.013.7314469
CGTAGTA3750.00137472713.45515251
GGAAACG31800.011.9986695
GCGCTTG7201.3633537E-510.9987795
TCTTCCG11001.4702891E-810.4715657
CCCGTAA6355.719916E-410.216231
AACGGGT7151.5353698E-410.0688128
GATTTCG15052.1827873E-1110.0453985
TCCGATC3950.09.84194610-14
TCGTTGG21400.09.7559279
CCCGAGT29750.08.9647181
TTCGTTG22600.08.9193648
Produced by FastQC (version 0.11.5)