FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14101406
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCCGA39100.052.1106579
TCTTCCG47250.043.8841368
CGTGTGC61700.033.075441
CGACGCT5450.021.245411
CGTTGGA74900.018.9372061
GTGCTCT132000.016.198674
TCCGATC28250.016.00492910-14
AACGGGA70500.015.7270948
GTGTGCT142500.015.444642
AAACGGG86000.015.4040987
GAAACGG90450.015.2034336
ACGGGAT50950.015.1201649
CCGATCT32650.014.95061710-14
TGTGCTC149200.014.0440353
GGAAACG96550.013.6463245
GCTCTTC154050.013.600296
TTCCGAT32400.012.71052810-14
TGCTCTT218500.010.0499825
AACGGGT22950.09.7251418
AGATCGG1507700.08.830404140-144
Produced by FastQC (version 0.11.5)