FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005072396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7526856
Sequences flagged as poor quality0
Sequence length50
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA377020.5008997116458718No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA101190.13443860225305226No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA91990.12221570334280342No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)