FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8457748
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG179090.21174667299143934No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACGT26300.0024522325.6751547145
GTTAAAT61800.05.10216671
GGCTAAT35203.420173E-75.08964871
GCGAAGT21350.0018538785.0348181
Produced by FastQC (version 0.11.5)